> ## Content Index
> Fetch the complete content index at: https://mfitzp.ghost.io/llms.txt
> Use this file to discover other available public pages before exploring further.

# Pathomx
- URL: https://mfitzp.ghost.io/pathomx/
- Published: 2013-11-13T00:00:00.000Z
- Updated: 2026-09-09T11:18:35.000Z
- Description: Speed up your analysis with interactive data workflows built on Python.
- Author: Martin Fitzpatrick
- Tags: Releases, Python, #Import 2026-08-24 14:26

Pathomx is a unique *workflow-based analysis tool* that provides complete analytical control while maximising usability.

Construct complex analysis workflows including *multivariate, univariate and pathway-mining approaches* from a simple drag-drop interface.

Configure tools and *immediately* see the result reflected downstream. Prototype scripts and share or export the result for others to replicate.

Pathomx is *free and open-source software*. See the published article for details:

[**Pathomx: an interactive workflow-based tool for the analysis of metabolomic data.**](http://www.biomedcentral.com/1471-2105/15/396?ref=mfitzp.ghost.io)  
Martin A. Fitzpatrick, Catherine M. McGrath, Stephen P. Young.  
*BMC Bioinformatics* [pmid:25490956](http://www.ncbi.nlm.nih.gov/pubmed/25490956?ref=mfitzp.ghost.io) [doi:10.1186/s12859-014-0396-9](http://dx.doi.org/10.1186/s12859-014-0396-9?ref=mfitzp.ghost.io) (October 2014)